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1

Brucellosis Transmission between Wildlife and Livestock in the Greater Yellowstone Ecosystem: Inferences from DNA Genotyping

O'Brien, Michael P., Beja-Pereira, Albano, Anderson, Neil, Ceballos, Ruben M., Edwards, William H., Harris, Beth, Wallen, Rick L., Costa, Vânia

Journal:

Journal of Wildlife Diseases

Year:

2017

Language:

english

File:

PDF, 163 KB

english, 2017

2

Donkey Domestication

Kimura, Birgitta, Marshall, Fiona, Beja-Pereira, Albano, Mulligan, Connie

Journal:

African Archaeological Review

Year:

2013

Language:

english

File:

PDF, 344 KB

english, 2013

3

Ancient DNA from Nubian and Somali wild ass provides insights into donkey ancestry and domestication

Kimura, B., Marshall, F. B., Chen, S., Rosenbom, S., Moehlman, P. D., Tuross, N., Sabin, R. C., Peters, J., Barich, B., Yohannes, H., Kebede, F., Teclai, R., Beja-Pereira, A., Mulligan, C. J.

Journal:

Proceedings Biological Sciences

Year:

2011

Language:

english

File:

PDF, 401 KB

english, 2011

4

Multiple maternal origins of chickens: Out of the Asian jungles

Yi-Ping Liu, Gui-Sheng Wu, Yong-Gang Yao, Yong-Wang Miao, Gordon Luikart, Mumtaz Baig, Albano Beja-Pereira, Zhao-Li Ding, Malliya Gounder Palanichamy, Ya-Ping Zhang

Journal:

Molecular Phylogenetics and Evolution

Year:

2006

Language:

english

File:

PDF, 430 KB

english, 2006

5

Chicken domestication: an updated perspective based on mitochondrial genomes

Miao, Y-W, Peng, M-S, Wu, G-S, Ouyang, Y-N, Yang, Z-Y, Yu, N, Liang, J-P, Pianchou, G, Beja-Pereira, A, Mitra, B, Palanichamy, M G, Baig, M, Chaudhuri, T K, Shen, Y-Y, Kong, Q-P, Murphy, R W, Yao, Y-G

Journal:

Year:

2013

Language:

english

File:

PDF, 1.73 MB

english, 2013

6

Morphological diversities and ecozones of Ethiopian horse populations

Kefena, E., Dessie, T., Han, J.L., Kurtu, M.Y., Rosenbom, S., Beja-Pereira, A.

Journal:

Animal Genetic Resources/Ressources génétiques animales/Recursos genéticos animales

Year:

2012

File:

PDF, 975 KB

2012

7

Detecting the T1 cattle haplogroup in the Iberian Peninsula from Neolithic to medieval times: new clues to continuous cattle migration through time

Colominas, Lídia, Edwards, Ceiridwen J., Beja-Pereira, Albano, Vigne, Jean-Denis, Silva, Raquel M., Castanyer, Pere, Tremoleda, Joaquim, Saña Seguí, Maria, Pérez-Ripoll, Manuel, Goyache, Felix, Howe,

Journal:

Journal of Archaeological Science

Year:

2015

Language:

english

File:

PDF, 1.03 MB

english, 2015

8

A standard set of polymorphic microsatellites for threatened mountain ungulates (Caprini, Artiodactyla)

C. Maudet, A. Beja-Pereira, E. Zeyl, H. Nagash, A. Kence, D. Özüt, M.-P. Biju-Duval, S. Boolormaa, D. W. Coltman, P. Taberlet, G. Luikart

Journal:

Molecular Ecology Resources

Year:

2004

Language:

english

File:

PDF, 96 KB

english, 2004

9

African Origins of the Domestic Donkey

Beja-Pereira, A.

Journal:

Year:

2004

Language:

english

File:

PDF, 73 KB

english, 2004

10

Cross-species genetic markers: a useful tool to study the world's most threatened wild equid—Equus africanus

Sónia Rosenbom, Vânia Costa, Beatrice Steck, Patricia Moehlman, Albano Beja-Pereira

Journal:

European Journal of Wildlife Research

Year:

2012

Language:

english

File:

PDF, 112 KB

english, 2012

11

Paternity assessment in free-ranging wild boar (Sus scrofa) – Are littermates full-sibs?

Rodrigo Delgado, Pedro Fernández-Llario, Marisa Azevedo, Albano Beja-Pereira, Pedro Santos

Journal:

Mammalian Biology - Zeitschrift für Säugetierkunde

Year:

2008

Language:

english

File:

PDF, 175 KB

english, 2008

12

Microsatellite markers for identification and parentage analysis in the European wild boar (Sus scrofa)

Vânia Costa, Javier Pérez-González, Pedro Santos, Pedro Fernández-Llario, Juan Carranza, Attila Zsolnai, István Anton, József Buzgó, Gyula Varga, Nuno Monteiro, Albano Beja-Pereira

Journal:

BMC Research Notes

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

13

Genetic diversity and matrilineal genetic signature of native Ethiopian donkeys (Equus asinus) inferred from mitochondrial DNA sequence polymorphism

Kefena, E., Dessie, T., Tegegne, A., Beja-Pereira, A., Yusuf Kurtu, M., Rosenbom, S., Han, J.L.

Journal:

Livestock Science

Year:

2014

Language:

english

File:

PDF, 740 KB

english, 2014

14

Genetic diversity of donkey populations from the putative centers of domestication

Rosenbom, S., Costa, V., Al-Araimi, N., Kefena, E., Abdel-Moneim, A. S., Abdalla, M. A., Bakhiet, A., Beja-Pereira, A.

Journal:

Animal Genetics

Year:

2015

Language:

english

File:

PDF, 333 KB

english, 2015

15

The origin of European cattle: Evidence from modern and ancient DNA

Beja-Pereira, A., Caramelli, D., Lalueza-Fox, C., Vernesi, C., Ferrand, N., Casoli, A., Goyache, F., Royo, L. J., Conti, S., Lari, M., Martini, A., Ouragh, L., Magid, A., Atash, A., Zsolnai, A., Bosca

Journal:

Proceedings of the National Academy of Sciences

Year:

2006

Language:

english

File:

PDF, 754 KB

english, 2006

16

DNA Genotyping Suggests that Recent Brucellosis Outbreaks in the Greater Yellowstone Area Originated from Elk

Beja-Pereira, Albano, Bricker, Betsy, Chen, Shanyuan, Almendra, Claudia, White, P. J., Luikart, Gordon

Journal:

Journal of Wildlife Diseases

Year:

2009

Language:

english

File:

PDF, 166 KB

english, 2009

17

Heterozygosity decrease in wild boar mating system - a case of outbreeding avoidance?

Pérez-González, J., Costa, V., Santos, P., Carranza, J., Zsolnai, A., Fernández-Llario, P., Monteiro, N. M., Anton, I., Beja-Pereira, A.

Journal:

Journal of Zoology

Year:

2016

Language:

english

File:

PDF, 236 KB

english, 2016

18

Improving DNA quality extracted from fecal samples—a method to improve DNA yield

Costa, Vânia, Rosenbom, Sónia, Monteiro, Rita, O’Rourke, Sean M., Beja-Pereira, Albano

Journal:

European Journal of Wildlife Research

Year:

2017

Language:

english

File:

PDF, 724 KB

english, 2017

19

Males and Females Contribute Unequally to Offspring Genetic Diversity in the Polygynandrous Mating System of Wild Boar

Pérez-González, Javier, Costa, Vânia, Santos, Pedro, Slate, Jon, Carranza, Juan, Fernández-Llario, Pedro, Zsolnai, Attila, Monteiro, Nuno M., Anton, István, Buzgó, József, Varga, Gyula, Beja-Pereira,

Journal:

Year:

2014

Language:

english

File:

PDF, 1.00 MB

english, 2014

20

Phylogenetic analysis of marginal Asiatic black bears reveals a recent IranianâHimalayan divergence and has implications for taxonomy and conservation

Yusefi, Gholam Hosein, Khalatbari, Leili, Jowers, Michael J., Fahimi, Hadi, Costa, VÃ¢nia, BjÃ¶rklund, Mats, Beja-Pereira, Albano

Journal:

Mammalian Biology - Zeitschrift für Säugetierkunde

Year:

2020

File:

PDF, 3.43 MB

2020

21

Grapevine clones discriminated using stilbene synthase–chalcone synthase markers

Miguel A Faria, Marisa Beja-Pereira, Antero Martins, Margarida A Ferreira, Maria Eugénia S Nunes

Journal:

Journal of the Science of Food and Agriculture

Year:

2004

Language:

english

File:

PDF, 272 KB

english, 2004

22

“HOOF-Print” genotyping and haplotype inference discriminates among Brucella spp. isolates from a small spatial scale

Cláudia Almendra, Teresa Luísa Silva, Albano Beja-Pereira, Ana Cristina Ferreira, Lénia Ferrão-Beck, Maria Inácia Corrêa de Sá, Betsy J. Bricker, Gordon Luikart

Journal:

Infection, Genetics and Evolution

Year:

2009

Language:

english

File:

PDF, 241 KB

english, 2009

23

Evidence for a geographical cline of casein haplotypes in Portuguese cattle breeds

A. Beja-Pereira, G. Erhardt, C. Matos, L. Gama, N. Ferrand

Journal:

Animal Genetics

Year:

2002

Language:

english

File:

PDF, 344 KB

english, 2002

24

Genetic polymorphism of the 17th exon at porcine RYR1 locus: a new variant in a local Portuguese pig breed demonstrated by SSCP analysis

Beja-Pereira, Bento, Ferrand, Brenig

Journal:

Journal of Animal Breeding and Genetics

Year:

2001

Language:

english

File:

PDF, 193 KB

english, 2001

25

Genetic structure of eighteen local south European beef cattle breeds by comparative F-statistics analysis

J. Jordana, P. Alexandrino, A. Beja-Pereira, I. Bessa, J. Cañon, Y. Carretero, S. Dunner, D. Laloë, K. Moazami-Goudarzi, A. Sanchez, N. Ferrand

Journal:

Journal of Animal Breeding and Genetics

Year:

2003

Language:

english

File:

PDF, 183 KB

english, 2003

26

Evolutionary patterns of two major reproduction candidate genes (Zp2andZp3) reveal no contribution to reproductive isolation between bovine species

Shanyuan Chen, Vânia Costa, Albano Beja-Pereira

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 1.06 MB

english, 2011

27

Exome-wide DNA capture and next generation sequencing in domestic and wild species

Ted Cosart, Albano Beja-Pereira, Shanyuan Chen, Sarah B Ng, Jay Shendure, Gordon Luikart

Journal:

Year:

2011

Language:

english

File:

PDF, 461 KB

english, 2011

28

High connectivity among argali sheep from Afghanistan and adjacent countries: Inferences from neutral and candidate gene microsatellites

G. Luikart, S. J. Amish, J. Winnie, A. Beja-Pereira, R. Godinho, F. W. Allendorf, R. B. Harris

Journal:

Conservation Genetics

Year:

2011

Language:

english

File:

PDF, 389 KB

english, 2011

29

Molecular evidence for fat-tailed sheep domestication

Joana Rocha, Shanyuan Chen, Albano Beja-Pereira

Journal:

Tropical Animal Health and Production

Year:

2011

Language:

english

File:

PDF, 210 KB

english, 2011

30

Y-specific microsatellites reveal an African subfamily in taurine (Bos taurus) cattle

L. Pérez-Pardal, L. J. Royo, A. Beja-Pereira, I. Curik, A. Traoré, I. Fernández, J. Sölkner, J. Alonso, I. Álvarez, R. Bozzi, S. Chen, F. A. Ponce de León, F. Goyache

Journal:

Animal Genetics

Year:

2010

Language:

english

File:

PDF, 230 KB

english, 2010

31

Genetic structure of the bovine Y-specific microsatellite UMN0103 reflects the genetic history of the species

L. Pérez-Pardal, C. Ginja, L. J. Royo, I. Álvarez, I. Fernández, A. del Valle, A. Traoré, F. A. Ponce de León, A. Beja-Pereira, M. C. T. Penedo, F. Goyache

Journal:

Animal Genetics

Year:

2011

Language:

english

File:

PDF, 85 KB

english, 2011

32

Mitochondrial DNA variation and genetic relationships in Spanish donkey breeds (Equus asinus)

J. Aranguren-Mendez, A. Beja-Pereira, R. Avellanet, K. Dzama, J. Jordana

Journal:

Journal of Animal Breeding and Genetics

Year:

2004

Language:

english

File:

PDF, 143 KB

english, 2004

33

Twenty polymorphic microsatellites in two of North Africa's most threatened ungulates: Gazella dorcas and Ammotragus lervia (Bovidae; Artiodactyla)

ALBANO BEJA-PEREIRA, EVE ZEYL, LAHOUSINE OURAGH, HAMID NAGASH, NUNO FERRAND, PIERRE TABERLET, GORDON LUIKART

Journal:

Molecular Ecology Resources

Year:

2004

Language:

english

File:

PDF, 85 KB

english, 2004

34

Allele frequencies and diversity parameters of 27 single nucleotide polymorphisms within and across goat breeds

I. CAPPUCCIO, L. PARISET, P. AJMONE-MARSAN, S. DUNNER, O. CORTES, G. ERHARDT, G. LÜHKEN, K. GUTSCHER, S. JOOST, I. J. NIJMAN, J. A. LENSTRA, P. R. ENGLAND, S. ZUNDEL, G. OBEXER-RUFF, A. BEJA-PEREIRA,

Journal:

Molecular Ecology Resources

Year:

2006

Language:

english

File:

PDF, 86 KB

english, 2006

35

BACA: a mitochondrial genome retriever, organizer and visualizer

T. ANTAO, A. BEJA-PEREIRA, M. M. FONSECA, D. J. HARRIS

Journal:

Molecular Ecology Resources

Year:

2007

Language:

english

File:

PDF, 139 KB

english, 2007

36

Multiple paternal origins of domestic cattle revealed by Y-specific interspersed multilocus microsatellites

Pérez-Pardal, L, Royo, L J, Beja-Pereira, A, Chen, S, Cantet, R J C, Traoré, A, Curik, I, Sölkner, J, Bozzi, R, Fernández, I

Journal:

Year:

2010

Language:

english

File:

PDF, 621 KB

english, 2010

37

Gene-culture coevolution between cattle milk protein genes and human lactase genes

Beja-Pereira, Albano, Luikart, Gordon, England, Phillip R, Bradley, Daniel G, Jann, Oliver C, Bertorelle, Giorgio, Chamberlain, Andrew T, Nunes, Telmo P, Metodiev, Stoitcho, Ferrand, Nuno

Journal:

Nature Genetics

Year:

2003

Language:

english

File:

PDF, 425 KB

english, 2003

38

Eco-geographical structuring and morphological diversities in Ethiopian donkey populations

E. Kefena, A. Beja-Pereira, J.L. Han, A. Haile, Y.K. Mohammed, T. Dessie

Journal:

Livestock Science

Year:

2011

Language:

english

File:

PDF, 674 KB

english, 2011

39

Discordances between morphological systematics and molecular taxonomy in the stem line of equids: A review of the case of taxonomy of genus Equus

E. Kefena, Y. Mekasha, J.L. Han, S. Rosenbom, A. Haile, T. Dessie, A. Beja-Pereira

Journal:

Livestock Science

Year:

2012

Language:

english

File:

PDF, 579 KB

english, 2012

40

Novel coding genetic variants of the GBP1 gene in wild and domestic pigs (Sus scrofa)

Shanyuan Chen, Rui Gomes, Vânia Costa, Isabel Rocha, Attila Zsolnai, István Anton, Rui Charneca, Pedro Santos, José Luis Nunes, József Buzgó, Gyula Varga, Ya-ping Zhang, Albano Beja-Pereira

Journal:

Livestock Science

Year:

2012

Language:

english

File:

PDF, 325 KB

english, 2012

41

Source of drug resistant Plasmodium falciparum in a potential malaria elimination site in Saudi Arabia

Hissa M. Al-Farsi, Zainab S. Al-Hashami, Saad M. Bin Dajem, Adel Ali H. Al-Sheikh, Ahmed Al-Qahtani, Albano Beja-Pereira, Mohamed A. Idris, Hamza A. Babiker

Journal:

Infection, Genetics and Evolution

Year:

2012

Language:

english

File:

PDF, 381 KB

english, 2012

42

LOSITAN: A workbench to detect molecular adaptation based on aFst-outlier method

Tiago Antao, Ana Lopes, Ricardo J Lopes, Albano Beja-Pereira, Gordon Luikart

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 368 KB

english, 2008

43

Argali Abundance in the Afghan Pamir Using Capture–Recapture Modeling From Fecal DNA

RICHARD B. HARRIS, JOHN WINNIE JR., STEPHEN J. AMISH, ALBANO BEJA-PEREIRA, RAQUEL GODINHO, VǍNIA COSTA, GORDON LUIKART

Journal:

Journal of Wildlife Management

Year:

2010

Language:

english

File:

PDF, 911 KB

english, 2010

44

Short Communication: New Alleles of the Bovine κ-Casein Gene Revealed by Resequencing and Haplotype Inference Analysis

S.Y. Chen, V. Costa, M. Azevedo, M. Baig, N. Malmakov, G. Luikart, G. Erhardt, A. Beja-Pereira

Journal:

Journal of Dairy Science

Year:

2008

Language:

english

File:

PDF, 225 KB

english, 2008

45

Advancing ecological understandings through technological transformations in noninvasive genetics

ALBANO BEJA-PEREIRA, RITA OLIVEIRA, PAULO C. ALVES, MICHAEL K. SCHWARTZ, GORDON LUIKART

Journal:

Molecular Ecology Resources

Year:

2009

Language:

english

File:

PDF, 1.26 MB

english, 2009

46

Development and evaluation of a selective medium for Brucella suis

Ferreira, Ana Cristina, Almendra, Cláudia, Cardoso, Regina, Pereira, Marta Silva, Beja-Pereira, Albano, Luikart, Gordon, Corrêa de Sá, Maria Inácia

Journal:

Research in Veterinary Science

Year:

2012

Language:

english

File:

PDF, 154 KB

english, 2012

47

Genetic diversity ofPlasmodium falciparumand distribution of drug resistance haplotypes in Yemen

Al-Hamidhi, Salama, Mahdy, Mohammed AK, Al-Hashami, Zainab, Al-Farsi, Hissa, Al-mekhlafi, Abdulsalam M, Idris, Mohamed A, Beja-Pereira, Albano, Babiker, Hamza A

Journal:

Malaria Journal

Year:

2013

Language:

english

File:

PDF, 317 KB

english, 2013

48

exonsampler : a computer program for genome-wide and candidate gene exon sampling for targeted next-generation sequencing

Cosart, Ted, Beja-Pereira, Albano, Luikart, Gordon

Journal:

Molecular Ecology Resources

Year:

2014

Language:

english

File:

PDF, 258 KB

english, 2014

49

Lack of mitochondrial DNA structure in Balkan donkey is consistent with a quick spread of the species after domestication

Pérez-Pardal, L., Grizelj, J., Traoré, A., Cubric-Curik, V., Arsenos, G., Dovenski, T., Marković, B., Fernández, I., Cuervo, M., Álvarez, I., Beja-Pereira, A., Curik, I., Goyache, F.

Journal:

Animal Genetics

Year:

2014

Language:

english

File:

PDF, 647 KB

english, 2014

50

Meta-Analysis of Mitochondrial DNA Reveals Several Population Bottlenecks during Worldwide Migrations of Cattle

Lenstra, Johannes, Ajmone-Marsan, Paolo, Beja-Pereira, Albano, Bollongino, Ruth, Bradley, Daniel, Colli, Licia, De Gaetano, Anna, Edwards, Ceiridwen, Felius, Marleen, Ferretti, Luca, Ginja, Catarina,

Journal:

Year:

2014

Language:

english

File:

PDF, 384 KB

english, 2014